Index

_

__init__() (pcnaDeep.evaluate.pcna_ctcEvaluator method)

A

align_table_and_mask() (in module pcnaDeep.data.utils)

B

break_track() (in module pcnaDeep.data.annotate)

C

check_continuous_track() (in module pcnaDeep.data.annotate)

D

deduce_transition() (in module pcnaDeep.data.utils)

E

evaluate() (pcnaDeep.evaluate.pcna_ctcEvaluator method)

expand_bbox() (in module pcnaDeep.data.utils)

F

filter_edge() (in module pcnaDeep.data.utils)

find_daugs() (in module pcnaDeep.data.utils) findM() (in module pcnaDeep.data.annotate)

G

generate_ctc() (pcnaDeep.evaluate.pcna_ctcEvaluator method) generate_raw() (pcnaDeep.evaluate.pcna_ctcEvaluator method)

get_lineage_txt() (in module pcnaDeep.data.annotate) get_outlier() (in module pcnaDeep.data.utils) getDetectInput() (in module pcnaDeep.data.utils)

I

init_ctc_dir() (pcnaDeep.evaluate.pcna_ctcEvaluator method)

J

json2mask() (in module pcnaDeep.data.utils)

L

label_by_track() (in module pcnaDeep.data.annotate)

load_PCNA_from_json() (in module pcnaDeep.data.preparePCNA) load_PCNAs_json() (in module pcnaDeep.data.preparePCNA)

M

mask2json() (in module pcnaDeep.data.utils) merge_obj_tables() (in module pcnaDeep.data.utils) module pcnaDeep.data.annotate pcnaDeep.data.preparePCNA pcnaDeep.data.utils pcnaDeep.evaluate

mt_dic2mt_lookup() (in module pcnaDeep.data.utils)

P

pcna_ctcEvaluator (class in pcnaDeep.evaluate) pcnaDeep.data.annotate module pcnaDeep.data.preparePCNA module

pcnaDeep.data.utils module pcnaDeep.evaluate module

R

relabel_trackID() (in module pcnaDeep.data.annotate)

retrieve() (in module pcnaDeep.data.utils)

S

save_seq() (in module pcnaDeep.data.annotate)

separate() (in module pcnaDeep.data.annotate) set_evSoft() (pcnaDeep.evaluate.pcna_ctcEvaluator method)